Indigo Utilities


We provide a number of freely available nodes for the KNIME workflow engine. The nodes are based on Indigo and its Java SDK.

Java GUI Utilities

Two Indigo-based Java GUI applications are provided:

  • Legio — combinatorial chemistry

  • ChemDiff — visual comparison of two SDF or SMILES files

Command-Line Utilities

Three Indigo-based command-line utilities written in plain C are provided:

  • indigo-depict (former dingo-render) Molecule and reaction rendering utility.

  • indigo-cano (former cano-utility) Canonical SMILES generator.

  • indigo-deco (former deco) R-Group deconvolution utility.